Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815458.1_cds_XP_016498331.1_12372
CDS Infomation

[gene=LOC107817066] [db_xref=GeneID:107817066] [protein=pentatricopeptide repeat-containing protein At3g29290-like isoform X2] [protein_id=XP_016498331.1] [location=join(7070..8308,8740..8946)] [gbkey=CDS]
Sequence

ATGAATACAAATATTGGAAATCTTGATACAAACCAATCTTCAAGTTTTCTTGAAGAAACT
AAAAATTCGGCTGAGGATGGGATTATGTACTTAGAAGAGATGAATGAGGAGGTATTGTCA
AAAAGGATCTTGAAGCTCAGCAGGCAAAATAAACCGAAAAGTGCATTGGCGATATACAAG
TCGATGACTTTTTCAGGTCTTAAACCTGATTTACATGCATGTAATTCCCTTCTTTCAAGT
CTCTTGAGGAATGGAATGCTTGATATTGCTTTAAAGATCTTCAACTCCATGAAGGCTAGT
GAGCTAACAACTGGCCACACTTATAGCTTAATTCTGAAGGCAGTTGCTGATGCTCGGGGT
TGTGACGCAGCAATGAACATGTTCAGTGAATTGATAAGCAGTAAGAATCTTAGAGAAAAA
ATTGACATTGTTGTATACAACACAATGATATCCATTTTTGCAAAAGCAAACAGCTGGTAT
CAGGCACAAAAGATCTGGAGCATTTTGACGGATAATGGTCAAGTTGGAACGATAGTCACT
TACCGTCTACTAGTTTGCACATTTGTTCGTTGTGGTCAGAATGAATTAGCTATTGATGCG
TACAGTGAGATGATTCGAAATGGATTGAGCCCTGAAGGTGATACAATGCATGCTATTATT
GGAGCATACACTAGGGAGGGTAAGTATGACTCTGCATTGAACGTCTTGCAATGTATGTTG
GACAACGAGCTGAAGCCAAATGCAAGAGCATGCAACGCTGTGATAAACTCACTTGGAAAA
GCTGGCAAAGTCAAGCTTTCATTTGAAGTTTATGAGTTGATGAAATCATTAGGTCATGCA
CCTGATGCGTACACATGGAATTCATTGCTCAATGCCTTAAACAGGGCAAATCGATATTCA
GAGGCACTTCAGCTCTTTGAGAGAATCAGGAATCCTCAAAGTGTCATTTTGAATGTGCAT
ATATACAATACTATTTTGACATCGTGCCACAGGCTTGGGTTGTGGGACAAAGCTGTACAG
ATACTGTGGCAGATGGAGGCTTCCGAAATCCCGGTTTCAACTGCATCCTATAATCAAGTA
ATTGGAGCTTGTGAGGTAGCGAGAAGGCCCAAGGTTGCGCTACAAGTTTATTACCGCATG
GTTCGCCAAAAACATTCTCCTGACATATTTACTCTATTGTCGTTGATGAGAGTTTGCATC
TGGGGTTCTCTCTGGAATGAAGCAGTGGAAATACTAAAACTTTCTGCACCAAATGGATCA
CTTTACAATGCTGCTATTCAAGGGATGTTTTTAACAGGAAAGATTGATTTGGCTAAGAAG
CTGTACACGGAAATGCGTGAAAGAGGCCTTCAACCTGATGGCAAGACACGGGCTATGATG
CTGCAAAACTTACCAAAGCATTCCATGAGAAATAGAAGGCGTAATGTGCAAAAATATAAA
TTTTGA

Peptide Sequence

PEP ID

XP_016498331.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like isoform X2 [Nicotiana tabacum]
Sequence

MNTNIGNLDTNQSSSFLEETKNSAEDGIMYLEEMNEEVLSKRILKLSRQNKPKSALAIYK
SMTFSGLKPDLHACNSLLSSLLRNGMLDIALKIFNSMKASELTTGHTYSLILKAVADARG
CDAAMNMFSELISSKNLREKIDIVVYNTMISIFAKANSWYQAQKIWSILTDNGQVGTIVT
YRLLVCTFVRCGQNELAIDAYSEMIRNGLSPEGDTMHAIIGAYTREGKYDSALNVLQCML
DNELKPNARACNAVINSLGKAGKVKLSFEVYELMKSLGHAPDAYTWNSLLNALNRANRYS
EALQLFERIRNPQSVILNVHIYNTILTSCHRLGLWDKAVQILWQMEASEIPVSTASYNQV
IGACEVARRPKVALQVYYRMVRQKHSPDIFTLLSLMRVCIWGSLWNEAVEILKLSAPNGS
LYNAAIQGMFLTGKIDLAKKLYTEMRERGLQPDGKTRAMMLQNLPKHSMRNRRRNVQKYK
F

Transcript Sequence

Gene sequence data has not been registered.